Package: WallomicsData 1.0

WallomicsData: Datasets for Multi-Omics Integration in a Plant Abiotic Stress Context

Datasets from the WallOmics project. Contains phenomics, metabolomics, proteomics and transcriptomics data collected from two organs of five ecotypes of the model plant Arabidopsis thaliana exposed to two temperature growth conditions. Exploratory and integrative analyses of these data are presented in Durufle et al (2020) <doi:10.1093/bib/bbaa166> and Durufle et al (2020) <doi:10.3390/cells9102249>.

Authors:Sébastien Déjean [aut, cre], Harold Duruflé [aut], Aurélie Mercadié [aut]

WallomicsData_1.0.tar.gz
WallomicsData_1.0.zip(r-4.5)WallomicsData_1.0.zip(r-4.4)WallomicsData_1.0.zip(r-4.3)
WallomicsData_1.0.tgz(r-4.4-any)WallomicsData_1.0.tgz(r-4.3-any)
WallomicsData_1.0.tar.gz(r-4.5-noble)WallomicsData_1.0.tar.gz(r-4.4-noble)
WallomicsData_1.0.tgz(r-4.4-emscripten)WallomicsData_1.0.tgz(r-4.3-emscripten)
WallomicsData.pdf |WallomicsData.html
WallomicsData/json (API)

# Install 'WallomicsData' in R:
install.packages('WallomicsData', repos = c('https://sebdejean.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Datasets:

On CRAN:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

0 exports 0.36 score 0 dependencies 1 dependents 2 scripts 299 downloads

Last updated 2 years agofrom:043c29c83b. Checks:OK: 7. Indexed: yes.

TargetResultDate
Doc / VignettesOKAug 26 2024
R-4.5-winOKAug 26 2024
R-4.5-linuxOKAug 26 2024
R-4.4-winOKAug 26 2024
R-4.4-macOKAug 26 2024
R-4.3-winOKAug 26 2024
R-4.3-macOKAug 26 2024

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Dependencies:

Readme and manuals

Help Manual

Help pageTopics
Altitude ClusterAltitude_Cluster
EcotypeEcotype
Genetic ClusterGenetic_Cluster
Metabolomics RosettesMetabolomics_Rosettes
Metabolomics StemsMetabolomics_Stems
MetadataMetadata
Phenomics RosettesPhenomics_Rosettes
Phenomics StemsPhenomics_Stems
Proteomics Rosettes Cell WallProteomics_Rosettes_CW
Proteomics Stems Cell WallProteomics_Stems_CW
TemperatureTemperature
Transcriptomics RosettesTranscriptomics_Rosettes
Transcriptomics Rosettes Cell WallTranscriptomics_Rosettes_CW
Transcriptomics StemsTranscriptomics_Stems
Transcriptomics Stems Cell WallTranscriptomics_Stems_CW